SAM and BAM handling for the Go language.
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bíogo/hts provides a Go native implementation of the SAM specification for
SAM and BAM alignment formats commonly used for representation of high
throughput genomic data, the BAI, CSI and tabix indexing formats, and the BGZF
blocked compression format. The bíogo/hts packages perform parallelized read
and write operations and are able to cache recent reads according to
user-specified caching methods. The bíogo/hts APIs have been constructed to
provide a consistent interface to sequence alignment data and the underlying
compression system in order to aid ease of use and tool development.
Installed Size: 1.1 MB
Architectures: all