- libc6 (>= 2.14)
- libgcc1 (>= 1:3.0)
- libspoa1.1.5 (>= 1.1.5)
- libstdc++6 (>= 5.2)
- zlib1g (>= 1:1.2.11.dfsg)
Spoa (SIMD POA) is a c++ implementation of the partial order alignment
(POA) algorithm (as described in 10.1093/bioinformatics/18.3.452) which
is used to generate consensus sequences (as described in
10.1093/bioinformatics/btg109). It supports three alignment modes: local
(Smith-Waterman), global (Needleman-Wunsch) and semi-global alignment
(overlap).
Installed Size: 103.4 kB
Architectures: amd64