- libbamtools2.5.1 (>= 2.5.1+dfsg)
- libc6 (>= 2.29)
- libgcc-s1 (>= 3.0)
- libgzstream0 (>= 1.5+dfsg)
- libhts3 (>= 1.10)
- libstdc++6 (>= 9)
- python3:any
- samblaster
- samtools
- python3
- python3-pysam
- python3-numpy
- bamkit
LUMPY, a novel SV discovery framework that naturally integrates multiple
SV signals jointly across multiple samples. LUMPY yields improved
sensitivity, especially when SV signal is reduced owing to either low
coverage data or low intra-sample variant allele frequency.
Installed Size: 576.5 kB
Architectures: arm64 amd64