pplacer - 1.1~alpha19-4 main

Pplacer places reads on a phylogenetic tree. guppy (Grand Unified
Phylogenetic Placement Yanalyzer) yanalyzes them. rppr is a helpful tool
for working with reference packages.
.
Pplacer places query sequences on a fixed reference phylogenetic tree to
maximize phylogenetic likelihood or posterior probability according to a
reference alignment. Pplacer is designed to be fast, to give useful
information about uncertainty, and to offer advanced visualization and
downstream analysis.