- libc6 (>= 2.14)
- python3 (<< 3.10)
- python3 (>= 3.9~)
- python3-numpy
- python3:any
The Nested Containment List is a datastructure for interval overlap
queries, like the interval tree. It is usually an order of magnitude
faster than the interval tree both for building and query lookups.
.
The implementation here is a revived version of the one used in the
now defunct PyGr library, which died of bitrot. It was now made less
memory-consuming and wrapper functions allow batch-querying
the NCLS for further speed gains.
.
This package was implemented to be the cornerstone of the PyRanges project,
but was made available to the Python community as a stand-alone library.
Installed Size: 4.6 MB
Architectures: amd64 arm64