q2-sample-classifier - 2020.11.1-3 main

QIIME 2 is a powerful, extensible, and decentralized microbiome analysis
package with a focus on data and analysis transparency. QIIME 2 enables
researchers to start an analysis with raw DNA sequence data and finish with
publication-quality figures and statistical results.
Key features:
* Integrated and automatic tracking of data provenance
* Semantic type system
* Plugin system for extending microbiome analysis functionality
* Support for multiple types of user interfaces (e.g. API, command line,
graphical)
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QIIME 2 is a complete redesign and rewrite of the QIIME 1 microbiome analysis
pipeline. QIIME 2 will address many of the limitations of QIIME 1, while
retaining the features that makes QIIME 1 a powerful and widely-used analysis
pipeline.
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QIIME 2 currently supports an initial end-to-end microbiome analysis pipeline.
New functionality will regularly become available through QIIME 2 plugins. You
can view a list of plugins that are currently available on the QIIME 2 plugin
availability page. The future plugins page lists plugins that are being
developed.
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Microbiome studies often aim to predict outcomes or differentiate samples
based on their microbial compositions, tasks that can be efficiently
performed by supervised learning methods. The q2-sample-classifier plugin
makes these methods more accessible, reproducible, and interpretable to
a broad audience of microbiologists, clinicians, and others who wish to
utilize supervised learning methods for predicting sample characteristics
based on microbiome composition or other "omics" data