- r-base-core (>= 4.0.0-3)
- r-api-4.0
- r-cran-biwt
- r-cran-cairodevice
- r-cran-fbasics
- r-cran-gplots
- r-cran-gwidgets
- r-cran-gwidgetsrgtk2
- r-cran-minerva
- r-cran-parmigene
- r-cran-stringr
- r-cran-snowfall
- libc6 (>= 2.4)
- libgomp1 (>= 6)
This package provides functions for calculating
associations between two genes with five correlation
methods(e.g., the Gini correlation coefficient [GCC], the
Pearson's product moment correlation coefficient [PCC], the
Kendall tau rank correlation coefficient [KCC], the Spearman's
rank correlation coefficient [SCC] and the Tukey's biweight
correlation coefficient [BiWt], and three non-correlation
methods (e.g., mutual information [MI] and the maximal
information-based nonparametric exploration [MINE], and the
euclidean distance [ED]). It can also been implemented to
perform the correlation and clustering analysis of
transcriptomic data profiled by microarray and RNA-Seq
technologies. Additionally, this package can be further applied
to construct gene co-expression networks (GCNs).
Installed Size: 252.9 kB
Architectures: arm64 amd64