edlib-aligner - 1.2.7-4+b1 main

Edlib is a lightweight and super fast C/C++ library for sequence
alignment using edit distance. This package provides an aligner
using this library.
.
Features of libedlib
.
* Calculates edit distance (Levehnstein distance).
* It can find optimal alignment path (instructions how to transform
first sequence into the second sequence).
* It can find just the start and/or end locations of alignment path -
can be useful when speed is more important than having exact
alignment path.
* Supports multiple alignment methods: global(NW), prefix(SHW) and
infix(HW), each of them useful for different scenarios.
* You can extend character equality definition, enabling you to e.g.
have wildcard characters, to have case insensitive alignment or to
work with degenerate nucleotides.
* It can easily handle small or very large sequences, even when finding
alignment path, while consuming very little memory.
* Super fast thanks to Myers's bit-vector algorithm.

Priority: optional
Section: science
Suites: amber byzantium crimson dawn landing 
Maintainer: Debian Med Packaging Team <debian-med-packaging [꩜] lists.alioth.debian.org>
 
Homepage Source Package
 

Dependencies

Installed Size: 89.1 kB
Architectures: amd64  arm64 

 

Versions

1.2.7-4+b1 arm64 1.2.7-4+b1 amd64