- libc6 (>= 2.17)
- libgcc-s1 (>= 3.0)
- libstdc++6 (>= 5.2)
- zlib1g (>= 1:1.1.4)
Gk-arrays are provided as a simple-to-use C++ library dedicated to
queries on large collection of sequences as produced by high-throughput
sequencers (e.g. HiSeq 2000 from Illumina, 454 from Roche).
.
Gk-arrays index k-mers of reads and allows one to answer different queries
on that read collection (e.g. how many reads share this k-mer? where does
this k-mer occur in the read collection?).
.
Gk-arrays consist of a space-efficient alternative to hash tables while
being similar in terms of query times.
Installed Size: 157.7 kB
Architectures: amd64 arm64