- r-base-core (>= 4.2.2.20221110-1)
- r-api-4.0
- r-api-bioc-3.16
- r-cran-mass
- r-bioc-genomicranges
- r-bioc-iranges
- r-bioc-s4vectors
- r-bioc-biocgenerics
- r-bioc-biocparallel
- r-bioc-limma
- r-bioc-edger
- r-cran-ggplot2
- r-cran-reshape2
Dirichlet-multinomial model in RNA-seq The package provides two
frameworks. One for the differential transcript usage analysis
between different conditions and one for the tuQTL analysis. Both
are based on modeling the counts of genomic features (i.e.,
transcripts) with the Dirichlet-multinomial distribution. The
package also makes available functions for visualization and
exploration of the data and results.
Installed Size: 1.0 MB
Architectures: all