Binary package r-bioc-genomicfeatures/1.50.4+dfsg-1 in crimson @ pureos

r-bioc-genomicfeatures - 1.50.4+dfsg-1 main

A set of tools and methods for making and manipulating transcript
centric annotations. With these tools the user can easily download the
genomic locations of the transcripts, exons and cds of a given organism,
from either the UCSC Genome Browser or a BioMart database (more sources
will be supported in the future). This information is then stored in a
local database that keeps track of the relationship between transcripts,
exons, cds and genes. Flexible methods are provided for extracting the
desired features in a convenient format.

Priority: optional
Section: gnu-r
Suites: amber byzantium crimson dawn landing
Maintainer: Debian R Packages Maintainers <r-pkg-team [꩜] alioth-lists.debian.net>

Homepage Source Package

Dependencies

r-base-core (>= 4.2.2.20221110-2)
r-api-4.0
r-api-bioc-3.16
r-bioc-biocgenerics (>= 0.1.0)
r-bioc-s4vectors (>= 0.17.29)
r-bioc-iranges (>= 2.13.23)
r-bioc-genomeinfodb (>= 1.34.7)
r-bioc-genomicranges (>= 1.31.17)
r-bioc-annotationdbi (>= 1.41.4)
r-cran-dbi
r-cran-rsqlite (>= 2.0)
r-cran-rcurl
r-bioc-xvector (>= 0.19.7)
r-bioc-biostrings (>= 2.47.6)
r-bioc-biocio
r-bioc-rtracklayer (>= 1.51.5)
r-bioc-biomart (>= 2.17.1)
r-bioc-biobase (>= 2.15.1)

Installed Size: 4.7 MB
Architectures: all

Versions

1.50.4+dfsg-1 all