- python3 (>= 3~)
- python3:any
- libc6 (>= 2.34)
- libgcc-s1 (>= 3.0)
- libstdc++6 (>= 11)
- zlib1g (>= 1:1.1.4)
- python3-setuptools
- default-jre
- bcftools
- bowtie2
- miniasm
- ncbi-blast+
- pilon
- racon
- samtools
- spades (>= 3.14)
Unicycler is an assembly pipeline for bacterial genomes. It can assemble
Illumina-only read sets where it functions as a SPAdes-optimiser. It can
also assembly long-read-only sets (PacBio or Nanopore) where it runs a
miniasm+Racon pipeline. For the best possible assemblies, give it both
Illumina reads and long reads, and it will conduct a hybrid assembly.
Installed Size: 3.2 MB
Architectures: amd64