- libc6 (>= 2.34)
- libgcc-s1 (>= 4.2)
- libqt5core5t64 (>= 5.15.1)
- libqt5gui5t64 (>= 5.8.0) | libqt5gui5-gles (>= 5.8.0)
- libqt5svg5 (>= 5.6.0~beta)
- libqt5widgets5t64 (>= 5.15.1)
- libstdc++6 (>= 13.1)
Bandage is a GUI program that allows users to interact with the assembly
graphs made by de novo assemblers such as Velvet, SPAdes, MEGAHIT and
others.
.
De novo assembly graphs contain not only assembled contigs but
also the connections between those contigs, which were previously not
easily accessible. Bandage visualises assembly graphs, with connections,
using graph layout algorithms. Nodes in the drawn graph, which represent
contigs, can be automatically labelled with their ID, length or depth.
Users can interact with the graph by moving, labelling and colouring
nodes. Sequence information can also be extracted directly from the
graph viewer. By displaying connections between contigs, Bandage opens
up new possibilities for analysing and improving de novo assemblies that
are not possible by looking at contigs alone.
.
More information and download links are on the Bandage website:
rrwick.github.io/Bandage
.
The package is relevant to the field of genome assembly.
Installed Size: 2.3 MB
Architectures: arm64 amd64