- antlr4
- libcommons-math3-java (>= 3.6.1)
- libhtsjdk-java (>= 3.0.2)
- libsnpeff-java
- libtrove3-java
SnpSift is a toolbox that allows one to filter and manipulate annotated files.
Once the genomic variants have been annotated, one needs to filter them out in
order to find the "interesting / relevant variants". Given the large data
files, this is not a trivial task (e.g. one cannot load all the variants into
XLS spreadsheet). SnpSift helps to perform this VCF file manipulation and
filtering required at this stage in data processing pipelines.
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This package contains the library.
Installed Size: 417.8 kB
Architectures: all