libbio-db-gff-perl - 1.7.4-1 main

Bio::DB::GFF provides fast indexed access to a sequence annotation database.
It supports multiple database types (ACeDB, relational), and multiple schemas
through a system of adaptors and aggregators.
.
The following operations are supported by this module:
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- retrieving a segment of sequence based on the ID of a landmark
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- retrieving the DNA from that segment
.
- finding all annotations that overlap with the segment
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- finding all annotations that are completely contained within the
segment
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- retrieving all annotations of a particular type, either within a
segment, or globally
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- conversion from absolute to relative coordinates and back again,
using any arbitrary landmark for the relative coordinates
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- using a sequence segment to create new segments based on relative
offsets