- murasaki-common
- libboost-filesystem1.83.0 (>= 1.83.0)
- libboost-iostreams1.83.0 (>= 1.83.0)
- libc6 (>= 2.38)
- libgcc-s1 (>= 3.0)
- libopenmpi40 (>= 5.0.6)
- libstdc++6 (>= 14)
Murasaki is a scalable and fast, language theory-based homology
detection tool across multiple large genomes. It enable whole-genome
scale multiple genome global alignments. Supports unlimited length
gapped-seed patterns and unique TF-IDF based filtering.
.
Murasaki is an anchor alignment software, which is
* exteremely fast (17 CPU hours for whole Human x Mouse genome (with
40 nodes: 52 wall minutes))
* scalable (Arbitrarily parallelizable across multiple nodes using MPI.
Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
* unlimited pattern length
* repeat tolerant
* intelligent noise reduction
.
This package provides the MPI-enabled binary for murasaki. While this
will speed up operation on multi-processor machines it will slow down
on a single processor.
Installed Size: 4.6 MB
Architectures: arm64 amd64