- r-api-4.0
- r-api-bioc-3.19
- r-cran-xfun
- r-cran-fs
- r-bioc-genomicranges
- r-cran-readr
- r-cran-cmdfun
- r-cran-dplyr
- r-cran-magrittr
- megadepth
This package provides an R interface to Megadepth by Christopher
Wilks available at https://github.com/ChristopherWilks/megadepth. It is
particularly useful for computing the coverage of a set of genomic regions
across bigWig or BAM files. With this package, you can build base-pair
coverage matrices for regions or annotations of your choice from BigWig
files. Megadepth was used to create the raw files provided by
https://bioconductor.org/packages/recount3.
Installed Size: 170.0 kB
Architectures: all