- r-api-4.0
- r-api-bioc-3.19
- r-bioc-deseq2 (>= 1.44.0)
- r-bioc-goseq (>= 1.56.0)
- r-cran-gplots
- r-bioc-biomart (>= 2.60.1)
- r-bioc-org.hs.eg.db (>= 3.19.1)
- r-bioc-go.db (>= 3.19.1)
- r-bioc-summarizedexperiment (>= 1.34.0)
- r-bioc-annotationdbi (>= 1.66.0)
R/GSEPD is a bioinformatics package for R to help
disambiguate transcriptome samples (a matrix of RNA-Seq counts
at transcript IDs) by automating differential expression (with
DESeq2), then gene set enrichment (with GOSeq), and finally a
N-dimensional projection to quantify in which ways each sample
is like either treatment group.
Installed Size: 1.5 MB
Architectures: all