- libbamtools2.5.2 (>= 2.5.2+dfsg)
- libc6 (>= 2.34)
- libgcc-s1 (>= 3.0)
- libgomp1 (>= 6)
- libstdc++6 (>= 11)
- zlib1g (>= 1:1.1.4)
- python3:any
- perl:any
- samtools
- python3-ruffus
- python3-pysam
The major goal of SGA is to be very memory efficient, which is achieved by
using a compressed representation of DNA sequence reads.
.
SGA is a de novo assembler for DNA sequence reads. It is based on Gene Myers'
string graph formulation of assembly and uses the FM-index/Burrows-Wheeler
transform to efficiently find overlaps between sequence reads.
Installed Size: 1.8 MB
Architectures: arm64 amd64