GNU R statistical analysis for sparse high-throughput sequencing

Bioconductor resampling-based multiple hypothesis testing

BioConductor collection of PCA methods

GNU R handling and analysis of high-throughput microbiome census data

BioConductor collection of pre-processing functions

S4 generic functions for Bioconductor proteomics infrastructure

GNU R package for Q-value estimation for FDR control

R interface to the graph algorithms contained in the BOOST library

GNU R binary alignment (BAM), variant call (BCF), or tabix file import

GNU R interface to genome browsers and their annotation tracks

BioConductor S4 implementation of vectors and lists

GNU R parse and analyze Illumina SAV files

GNU R sequence logos for DNA sequence alignments

GNU R classes and methods for high-throughput short-read sequencing data

BioConductor SnpMatrix and XSnpMatrix classes and methods

BioConductor assay container

GNU R Transcription Factor Binding Site (TFBS) Analysis

BioConductor annotation of genetic variants

BioConductor representation and manpulation of external sequences

(Virtual) zlibbioc Bioconductor package

GNU R abind multi-dimensional array combination function

GNU R package for regression transformations

GNU R analysis of ecological data

GNU R exploratory analysis of genetic and genomic data

GNU R lattice-based package for the representation of multivariate data

GNU R exploratory analyses for the phylogenetic comparative method

Applied Econometrics with R

GNU R package for analyzing factorial experiments using ANOVA or mixed models

Immunoglobulin Clonal Lineage and Diversity Analysis

GNU R package supporting multiple imputation of missing data

GNU R: A MORE flexible neural network package

GNU R gallery of animations and utilities to create animations

GNU R package for Analyses of Phylogenetics and Evolution

Another Plot PACKage: stem.leaf, bagplot, faces, spin3R and others

Data Analysis Using Regression and Multilevel/Hierarchical Models

safe password entry for GNU R, Git, and SSH

GNU R easy pre and post assertions

reimplementation of functions introduced since R-3.0.0

GNU R package that provides tools for base64 encoding

GNU R fast and URL-safe Base64 encoder and decoder

GNU R batch computing

GNU R tools for computation on batch systems

GNU R Bayes factors for t-tests, ANOVAs and contingency tables

GNU R package for Bayesian inference

GNU R plotting for bayesian models

GNU R Miscellaneous helper functions for B. Bischl

GNU R tools for general maximum likelihood estimation

GNU R routines for block diagonal symmetric matrices

bee swarm plot, an alternative to stripchart

(Virtual) GNU R package to provide BH