integrated RNA-Seq read analysis

Evolving Artificial Life

Convert CTD files into Galaxy tool and CWL CommandLineTool files

Computed tomography simulator

Online help file for CTSim

Clean biological sequences from high-throughput sequencing reads

code formatter for Common Workflow Language

Common Workflow Language reference implementation

local alignment discovery between long nucleotide sequencing reads

long read to reference genome mapping tool

Open Source Neural Networks in C

alignment-based scrubbing pipeline for DNA sequencing reads

data files management and distribution platform

DataLad extension for working with containerized environments

simulate the evolution of recombinant DNA sequences

manage nucleotide sequencing read data

GFD-DENNOU Club Library (DCL) - FORTRAN77 version

next generation DICOM to NIfTI converter

OFFIS DICOM toolkit command line utilities

Debian Astronomy Pure Blends Logo

alternative basecaller for MinION reads of genomic sequences

alternative basecaller for MinION reads of genomic sequences (data)

Structural variant discovery by read analysis

Calculates per-residue electron density scores

(d)extractor and compression command library

Debian helper tools for packaging R libraries

Segment-based multiple sequence alignment

Segment-based multiple sequence alignment

Segment-based multiple sequence alignment (data files)

accelerated BLAST compatible local sequence aligner

converts DICOM files into the NIfTI format

Distributed Memory Based Learner

discovering Single Nucleotide Polymorphism from raw set(s) of reads

cysteines disulfide bonding state and connectivity predictor

data files for predictor of disulfide bonds in proteins

Swiss Army Knife of Deep Learning Models

tool for clustering millions of short DNA sequences

adapter prediction for small RNA sequencing - utils

detailed comparison of two genomic sequences

simulator for chemical mixtures

databases for chemical mixtures

Interactive language for handling numbers, strings, and matrices

crystal structure viewer

analyzing Drop-seq data (testdata)

analyzing Drop-seq data

Command-line tools for the Data Reference Syntax library

Software for Semidefinite Programming

protein secondary structure assignment based on 3D structure

short sequencing read simulator

OpenDX (IBM Visualization Data Explorer) - main package