Contents of section "Science" in suite "crimson"

art-nextgen-simulation-tools-profiles

profiles for art simulation tools

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asdftool

Command line tool to manipulate ASDF scientific data files

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ase

Atomic Simulation Environment

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assembly-stats

get assembly statistics from FASTA and FASTQ files

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assemblytics

detect and analyze structural variants from a genome assembly

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astap

astrometric (plate) solver, stacking of images, photometry and FITS viewer

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astap-cli

astrometric (plate) solver, command line version

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astromatic

Astronomical pipeline software collection

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astrometry-data-tycho2

Astrometry.net Tycho-2 index files

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astrometry-data-tycho2-07

Astrometry.net Tycho-2 index files (22'-30')

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astrometry-data-tycho2-07-bigendian

Astrometry.net Tycho-2 big endian index files (22'-30')

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astrometry-data-tycho2-07-littleendian

Astrometry.net Tycho-2 little endian index files (22'-30')

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astrometry-data-tycho2-08

Astrometry.net Tycho-2 index files (30'-44')

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astrometry-data-tycho2-08-bigendian

Astrometry.net Tycho-2 big endian index files (30'-44')

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astrometry-data-tycho2-08-littleendian

Astrometry.net Tycho-2 little endian index files (30'-44')

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astrometry-data-tycho2-09

Astrometry.net Tycho-2 index files (44'-60')

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astrometry-data-tycho2-09-bigendian

Astrometry.net Tycho-2 big endian index files (44'-60')

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astrometry-data-tycho2-09-littleendian

Astrometry.net Tycho-2 little endian index files (44'-60')

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astrometry-data-tycho2-10-19

Astrometry.net Tycho-2 index files (60'-2000')

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astrometry-data-tycho2-10-19-bigendian

Astrometry.net Tycho-2 big endian index files (60'-2000')

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astrometry-data-tycho2-10-19-littleendian

Astrometry.net Tycho-2 little endian index files (60'-2000')

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astrometry.net

Astrometry plate solver

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astronomical-almanac

astronomical almanac - calculate planet and star positions

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astropy-utils

Command line tools from astropy

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astro-tasks

Debian Astronomy Pure Blend (tasksel tasks)

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atac

genome assembly-to-assembly comparison

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ataqv

ATAC-seq QC and visualization

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atropos

NGS read trimming tool that is specific, sensitive, and speedy

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augur

pipeline components for real-time virus analysis

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augustus

gene prediction in eukaryotic genomes

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augustus-data

data files for AUGUSTUS

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autodock

analysis of ligand binding to protein structure

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autodock-getdata

instructions for getData to collect compounds

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autodock-test

test files for AutoDock

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autodock-vina

docking of small molecules to proteins

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autogrid

pre-calculate binding of ligands to their receptor

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autogrid-test

test files for AutoGrid

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avce00

Conversion of ESRI Arcinfo Vector Coverage in E00 format

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avogadro

Molecular Graphics and Modelling System

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avogadro-utils

Molecular Graphics and Modelling System (library)

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axe-demultiplexer

Trie-based DNA sequencing read demultiplexer

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bagel

Computational Chemistry Package

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baitfisher

software package for designing hybrid enrichment probes

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bali-phy

Bayesian Inference of Alignment and Phylogeny

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ballview

free molecular modeling and molecular graphics tool

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bamclipper

Remove gene-specific primer sequences from SAM/BAM alignments

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bamkit

tools for common BAM file manipulations

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bamtools

toolkit for manipulating BAM (genome alignment) files

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bandage

Bioinformatics Application for Navigating De novo Assembly Graphs Easily

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bandage-examples

Bioinformatics Application for Navigating De novo Assembly Graphs Easily (data)

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