Contents of section "Science" in suite "dawn"

microbiomeutil-data

Reference 16S sequences and NAST-alignments used by microbiomeutil tools

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microhope

hardware & software framework to learn microcontrollers

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minc-tools

MNI medical image format tools

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minia

short-read biological sequence assembler

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miniasm

ultrafast de novo assembler for long noisy DNA sequencing reads

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minimac4

Fast Imputation Based on State Space Reduction HMM

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minimap

tool for approximate mapping of long biosequences such as DNA reads

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minimap2

versatile pairwise aligner for genomic and spliced nucleotide sequences

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minisat

Fast and lightweight SAT solver

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minisat+

solver for pseudo-Boolean constraints

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mipe

Tools to store PCR-derived data

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mira-assembler

Whole Genome Shotgun and EST Sequence Assembler

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mira-rfam-12s-rrna

extract of RFAM 12 rRNA database

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mirtop

annotate miRNAs with a standard mirna/isomir naming

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missfits

Basic maintenance and packaging tasks on FITS files

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mitools

view, convert and perform basic maths with medical image datasets

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mlv-smile

Find statistically significant patterns in sequences

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mmb

model the structure and dynamics of macromolecules

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mmb-common

model the structure and dynamics of macromolecules (common files)

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mmmulti

memory backed multimap

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mmseqs2

ultra fast and sensitive protein search and clustering

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mmseqs2-examples

optional resources for the mmseqs2 package

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mocassin

MOnte CArlo SimulationS of Ionised Nebulae

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mocassin-benchmarks

benchmarks for the photoionisation code MOCASSIN

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mocassin-data

atomic and optical data for the photoionisation code MOCASSIN

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mocassin-examples

Examples for the photoionisation code MOCASSIN

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molequeue

Desktop integration of high performance computing resources

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mona

theorem prover based on automata

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montage

Toolkit for assembling FITS images into mosaics

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montage-gridtools

Create files to run montage on the grid

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mopac

Molecular Orbital PACkage (MOPAC)

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mopac7-bin

Semi-empirical Quantum Chemistry Library (binaries)

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mothur

sequence analysis suite for research on microbiota

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mpb

MIT Photonic-Bands

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mpb-mpi

MIT Photonic-Bands, parallel (mpich) version

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mpb-scm

MIT Photonic-Bands initialisation files

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mpgrafic

MPI version of N-body initial conditions grafic package

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mpsolve

Multiprecision polynomial solver (command line version)

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mptp

single-locus species delimitation

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mrbayes

Bayesian Inference of Phylogeny

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mrbayes-mpi

Bayesian Inference of Phylogeny - mpi version

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mricron

magnetic resonance image conversion, viewing and analysis

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mricron-data

data files for MRIcron

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mrpt-apps

Mobile Robot Programming Toolkit - Console and GUI applications

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mrpt-common

Mobile Robot Programming Toolkit - Example datasets and files

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mrtrix3

diffusion-weighted MRI white matter tractography

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mseed2sac

Convert MiniSEED time series data to SAC

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multiqc

output integration for RNA sequencing across tools and samples

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mummer

Efficient sequence alignment of full genomes

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murasaki

homology detection tool across multiple large genomes

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