transmembrane topology prediction

Application to calculate ramachandran z-scores

Exact combinatorial optimization for Graphical Models

Exact combinatorial optimization for Graphical Models - documentation

bulk submission of chromatogram data to dbEST

Documentation and sample files for trace2dbest

interpretation of DNA Sanger sequencing data

find coding regions within RNA transcript sequences

Runs formatted documents through transformations/translation

helper for transrate

find rho-independent transcription terminators in bacterial genomes

trajectory analyzer and visualizer

Parallelized reconstruction of phylogenetic trees by maximum likelihood

Reconstruction of phylogenetic trees by maximum likelihood

Java re-implementation of Michael Eisen's TreeView

Displays and prints phylogenetic trees

locate and display tandem repeats in DNA sequences

locate and display tandem repeats in DNA sequences (examples)

automate quality and adapter trimming for DNA sequencing

flexible read trimming tool for Illumina NGS data

toolkit to carry out genetic association for multi-category phenotypes

RNA-Seq De novo Assembly

RNA-Seq De novo Assembly common example and testing files

Cave Survey drawing software

genetic variant caller for Ion Torrent sequencing platforms

tiny web map service

build the compacted de Bruijn graph from many complete genomes

2.4 GHz wireless development platform for Bluetooth experimentation

Firmware for Ubertooth

Source code for the Ubertooth firmware

error correction algorithm designed for short-reads from NGS

Unicode Tokenizer

Data files for Ucto

Utilities for the UCX messaging library

integrated bioinformatics toolkit

required data for UGENE - integrated bioinformatics toolkit

universal hardware driver for Ettus Research products - host apps

Utility for Nanopore Current Alignment to Large Expanses of DNA

hybrid assembly pipeline for bacterial genomes

hybrid assembly pipeline for bacterial genomes (data package)

high-performance phylogenetic diversity calculations (binaries)

Unihedron Device manager (UDM)

Toolkit for nucleic acid k-mer analysis

Parser for expressions concerning physical values

Powerful units converter with a GUI

Visualization Applet for RNA

annotate a VCF with other VCFs/BEDs/tabixed files

examples for vcfanno: annotate a VCF with other VCFs/BEDs/tabixed files

Collection of tools to work with VCF files

Nucleic acid sequence assembler for very short reads