- libc6 (>= 2.17)
- libgcc1 (>= 1:3.0)
- libgomp1 (>= 4.9)
- libhts2 (>= 1.0)
- libstdc++6 (>= 5.2)
- zlib1g (>= 1:1.2.6)
- python:any (>= 2.6.6-7~)
- samtools
- libdbi-perl
Stacks is a software pipeline for building loci from short-read sequences,
such as those generated on the Illumina platform. Stacks was developed to work
with restriction enzyme-based data, such as RAD-seq, for the purpose of
building genetic maps and conducting population genomics and phylogeography.
.
Note that this package installs Stacks such that all commands must be run as:
$ stacks
Installed Size: 4.5 MB
Architectures: amd64 arm64