The tools SEPP and TIPP implementing these methods use ensembles of Hidden
Markov Models (HMMs) in different ways, each focusing on a different problem.
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SEPP stands for "SATe-enabled Phylogenetic Placement", and addresses the
problem of phylogenetic placement of short reads into reference
alignments and trees.
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TIPP stands for "Taxonomic Identification and Phylogenetic Profiling",
and addresses the problem of taxonomic identification and abundance
profiling of metagenomic data.
Installed Size: 564.2 kB
Architectures: amd64