bifrost - 1.3.1-1 main

Bifrost is a command-line tool for sequencing that features a broad
range of functions, such as indexing, editing, and querying the graph,
and includes a graph coloring method that maps each k-mer of the graph
to the genomes it occurs in.
.
* Build, index, color and query the compacted de Bruijn graph
* No need to build the uncompacted de Bruijn graph
* Reads or assembled genomes as input
* Output graph in GFA (can be visualized with Bandage), FASTA or binary
* Graph cleaning: short tip clipping, etc.
* Multi-threaded
* No parameters to estimate with other tools
* Exact or approximate k-mer search of queries

Priority: optional
Section: python
Suites: dawn landing 
Maintainer: Debian Med Packaging Team <debian-med-packaging [꩜] lists.alioth.debian.org>
 
Homepage Source Package
 

Dependencies

Installed Size: 1.2 MB
Architectures: amd64  arm64 

 

Versions

1.3.1-1 arm64 1.3.1-1 amd64