- r-api-4.0
- r-api-bioc-3.19
- r-bioc-limma (>= 3.60.3)
- r-bioc-dexseq (>= 1.50.0)
- r-bioc-saturn (>= 1.12.0)
- r-bioc-sva (>= 3.52.0)
- r-cran-ggplot2 (>= 3.3.5)
- r-bioc-pfamanalyzer (>= 1.4.0)
- r-bioc-bsgenome (>= 1.72.0)
- r-cran-plyr
- r-cran-reshape2
- r-cran-gridextra
- r-bioc-biostrings (>= 2.72.1)
- r-bioc-iranges (>= 2.38.1)
- r-bioc-genomicranges (>= 1.56.1)
- r-cran-rcolorbrewer
- r-bioc-rtracklayer (>= 1.64.0)
- r-cran-venndiagram
- r-cran-dbi
- r-bioc-genomeinfodb (>= 1.40.1)
- r-bioc-tximport (>= 1.32.0)
- r-bioc-tximeta (>= 1.22.1)
- r-bioc-edger (>= 4.2.0)
- r-cran-futile.logger
- r-cran-stringr
- r-cran-dplyr
- r-cran-magrittr
- r-cran-readr
- r-cran-tibble
- r-bioc-xvector (>= 0.44.0)
- r-bioc-biocgenerics (>= 0.50.0)
- r-cran-rcurl
- r-bioc-biobase (>= 2.64.0)
- r-bioc-summarizedexperiment (>= 1.34.0)
- r-cran-tidyr
- r-bioc-s4vectors (>= 0.42.1)
- r-bioc-biocparallel (>= 1.38.0)
- r-bioc-pwalign (>= 1.0.0-2~0exp1)