Contents of section "Science" in suite "amber"

python3-amp

Atomistic Machine-learning Package (python 3)

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python3-bcbio

library for analysing high-throughput sequencing data

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python3-gffutils

Work with GFF and GTF files in a flexible database framework

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python3-pybel

Biological Expression Language

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python3-pybigwig

Python 3 module for quick access to bigBed and bigWig files

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python3-pynlpl

PyNLPl is a library for Natural Language Processing (Python 3 version)

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python-drizzle-testdata

Dithered image combination for Python (Test data)

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python-pybigwig

Python 2 module for quick access to bigBed and bigWig files

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python-pynlpl

PyNLPl is a library for Natural Language Processing (Python 2 version)

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pyzo

interactive editor for scientific Python

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qcumber

quality control of genomic sequences

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qfits-tools

FITS manipulation tools

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qfitsview

FITS file viewer based on DPUSER

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qgis

Geographic Information System (GIS)

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qgis-api-doc

QGIS API documentation

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qgis-common

QGIS - architecture-independent data

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qgis-plugin-grass

GRASS plugin for QGIS

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qgis-plugin-grass-common

GRASS plugin for QGIS - architecture-independent data

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qgis-provider-grass

GRASS provider for QGIS

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qgis-providers

collection of data providers to QGIS

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qgis-providers-common

collection of data providers to QGIS - architecture-independent files

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qgis-server

QGIS server providing various OGC services

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qmapshack

GPS mapping (GeoTiff and vector) and GPSr management

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qmc

Quine McClusky Simplification Tool

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qnifti2dicom

convert 3D medical images to DICOM 2D series (gui)

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qrisk2

cardiovascular disease risk calculator

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qthid-fcd-controller

Funcube Dongle controller

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qtltools

Tool set for molecular QTL discovery and analysis

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quantum-espresso

Electronic-Structure and Ab-Initio Molecular Dynamics Suite

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quantum-espresso-data

Electronic-Structure and Ab-Initio Molecular Dynamics Suite (Documentation)

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quorum

QUality Optimized Reads of genomic sequences

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qutemol

interactive visualization of macromolecules

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racon

consensus module for raw de novo DNA assembly of long uncorrected reads

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radiant

explore hierarchical metagenomic data with zoomable pie charts

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rambo-k

Read Assignment Method Based On K-mers

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rampler

module for sampling genomic sequences

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rapmap

rapid sensitive and accurate DNA read mapping via quasi-mapping

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rapmap-dev

rapmap - rapid sensitive and accurate DNA read mapping (some headers)

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rapmap-example-data

example data for rapmap - rapid sensitive and accurate DNA read mapping

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rasmol

visualization of biological macromolecules

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raster3d

tools for generating images of proteins or other molecules

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rate4site

detector of conserved amino-acid sites

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rawtran

RAW photo to FITS converter

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raxml

Randomized Axelerated Maximum Likelihood of phylogenetic trees

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ray

de novo genome assemblies of next-gen sequencing data

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ray-extra

Scripts and XSL sheets for post-processing for ray

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r-cran-sdmtools

Species Distribution Modelling Tools

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rdkit-data

Collection of cheminformatics and machine-learning software (data files)

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rdp-classifier

extensible sequence classifier for fungal lsu, bacterial and archaeal 16s

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readseq

Conversion between sequence formats

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