Contents of section "Science" in suite "amber"

beast2-mcmc

Bayesian MCMC phylogenetic inference

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beast-mcmc

Bayesian MCMC phylogenetic inference

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bedops

high-performance genomic feature operations

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bedtools

suite of utilities for comparing genomic features

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bedtools-test

test data for the bedtools package

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belvu

multiple sequence alignment viewer and phylogenetic tool

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berkeley-express

Streaming quantification for high-throughput sequencing

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bibus

bibliographic database

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bio-eagle

Haplotype phasing within a genotyped cohort or using a phased reference panel

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bio-eagle-examples

Examples for bio-eagle

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biogenesis

artificial life program that simulates evolution of organisms

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bioperl

Perl tools for computational molecular biology

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bioperl-run

BioPerl wrappers: scripts

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bio-rainbow

clustering and assembling short reads for bioinformatics

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biosig-tools

format conversion tools for biomedical data formats

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biosquid

utilities for biological sequence analysis

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biosyntax

Syntax Highlighting for Computational Biology (metapackage)

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biosyntax-common

Syntax Highlighting for Computational Biology (common files)

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biosyntax-example

Syntax Highlighting for Computational Biology (example)

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biosyntax-gedit

Syntax Highlighting for Computational Biology (gedit)

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biosyntax-less

Syntax Highlighting for Computational Biology (less)

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biosyntax-vim

Syntax Highlighting for Computational Biology (vim)

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bist

chemical drawing tool

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bitseq

Bayesian Inference of Transcripts from Sequencing Data

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bkchem

Chemical structures editor

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blasr

mapping single-molecule sequencing reads

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blast2

transitional dummy package to ncbi-blast+-legacy

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blixem

interactive browser of sequence alignments

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bmt

software analysis benchmarking toolkit

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bodr

Blue Obelisk Data Repository

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bolt-lmm

Efficient large cohorts genome-wide Bayesian mixed-model association testing

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bolt-lmm-example

Examples for bolt-lmm

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boolector

SMT solver for bit-vectors and arrays

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bowtie

Ultrafast memory-efficient short read aligner

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bowtie2

ultrafast memory-efficient short read aligner

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bowtie2-examples

Examples for bowtie2

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bowtie-examples

Examples for bowtie, the ultrafast memory-efficient short read aligner

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boxshade

Pretty-printing of multiple sequence alignments

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bppphyview

Bio++ Phylogenetic Viewer

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bppsuite

Bio++ program suite

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bppsuite-examples

Examples for Bio++ program suite

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brig

BLAST Ring Image Generator

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bwa

Burrows-Wheeler Aligner

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cafeobj

new generation algebraic specification and programming language

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cafeobj-mode

Emacs major mode for editing CafeOBJ source code

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caffe-cpu

Fast, open framework for Deep Learning (Meta)

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caffe-tools-cpu

Tools for fast, open framework for Deep Learning (CPU_ONLY)

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cain

simulations of chemical reactions

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cain-examples

examples for cain

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cain-solvers

solvers for cain

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