Contents of section "Science" in suite "amber"

calculix-ccx

Three-Dimensional Structural Finite Element Program

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calculix-cgx

Calculix cgx is a 3-dimensional pre- and post-processor for fem

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camitk-actionstatemachine

pipeline replay application for the CamiTK library

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camitk-config

Computer Assisted Medical Intervention Tool Kit - config

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camitk-imp

workbench application for the CamiTK library

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canu

single molecule sequence assembler for genomes

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casacore-data-igrf

International Geomagnetic Reference Field data for casacore

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casacore-data-jpl-de200

Jet Propulsion Laboratory Development Ephemeris DE200 for casacore

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casacore-data-jpl-de405

Jet Propulsion Laboratory Development Ephemeris DE405 for casacore

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casacore-data-lines

Table of spectral line frequencies for casacore

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casacore-data-observatories

Table of radio observatory coordinates for casacore

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casacore-data-sources

Table of ICRF reference source coordinates for casacore

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casacore-data-tai-utc

Difference table between TAI and UTC for casacore

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casacore-tools

Tools built with CASA

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cassbeam

Cassegrain antenna modelling

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cassiopee

index and search tool in genomic sequences

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cba

Continuous Beam Analysis

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cbflib-bin

utilities to manipulate CBF files

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cbmc

bounded model checker for C and C++ programs

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cclib

Parsers and algorithms for computational chemistry

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cct

visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences

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cct-examples

example data for testing the package cct

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cdbfasta

Constant DataBase indexing and retrieval tools for multi-FASTA files

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cd-hit

suite of programs designed to quickly group sequences

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centrifuge

rapid and memory-efficient system for classification of DNA sequences

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cernlib

CERNLIB data analysis suite - general use metapackage

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cernlib-core

CERNLIB data analysis suite - main libraries and programs

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cernlib-extras

CERNLIB data analysis suite - extra programs

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cernlib-montecarlo

CERNLIB Monte Carlo libraries

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cg3

Tools for using the 3rd edition of Constraint Grammar (CG-3)

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cgns-convert

CFD General Notation System - Conversion tools

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cgview

Circular Genome Viewer

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ch5m3d

create and visualize 3-dimensional drawings of simple molecules

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changeo

Repertoire clonal assignment toolkit (Python 3)

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checkit-tiff

conformance checker for baseline TIFFs

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chemical-structures

set of molecular structures in open formats

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chemps2

Executable to call libchemps2-3 from the command line

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chemtool

chemical structures drawing program

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chimeraslayer

detects likely chimeras in PCR amplified DNA

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chromhmm

Chromatin state discovery and characterization

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chromimpute

Large-scale systematic epigenome imputation

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circlator

circularize genome assemblies

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circos

plotter for visualizing data

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circos-tools

plotter for visualizing data - helper utilities

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ckon

automatic build tool for ROOT data analysis software

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clearcut

extremely efficient phylogenetic tree reconstruction

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clonalframe

inference of bacterial microevolution using multilocus sequence data

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clonalframeml

Efficient Inference of Recombination in Whole Bacterial Genomes

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clonalorigin

inference of homologous recombination in bacteria using whole genome sequences

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clustalo

General purpose multiple sequence alignment program for proteins

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