Contents of section "Science" in suite "byzantium"

lorene

framework for numerical relativity

main
lorene-codes-src

source files of LORENE-based codes

main
ltrsift

postprocessing and classification of LTR retrotransposons

main
lttoolbox-dev

Development tools and library for lttoolbox

main
lucy

DNA sequence quality and vector trimming tool

main
lumpy-sv

general probabilistic framework for structural variant discovery

main
lumpy-sv-examples

general probabilistic framework for structural variant discovery (data)

main
lutefisk

de novo interpretation of peptide CID spectra

main
lxi-tools

LAN eXtensions for Instrumentation (LXI) software interface

main
macs

Model-based Analysis of ChIP-Seq on short reads sequencers

main
macsyfinder

detection of macromolecular systems in protein datasets

main
maffilter

process genome alignment in the Multiple Alignment Format

main
maffilter-examples

process genome alignment in the Multiple Alignment Format (example data)

main
mafft

Multiple alignment program for amino acid or nucleotide sequences

main
mandelbrot-solver

Solver for Mandelbrot polynomials based on MPSolve

main
mapdamage

tracking and quantifying damage patterns in ancient DNA sequences

main
mapsembler2

bioinformatics targeted assembly software

main
maq

maps short fixed-length polymorphic DNA sequence reads to reference sequences

main
maqview

graphical read alignment viewer for short gene sequences

main
mash

fast genome and metagenome distance estimation using MinHash

main
massxpert

polymer chemistry modelling and mass spectrometry data simulation (runtime)

main
massxpert-data

polymer chemistry modelling and mass spectrometry data simulation (data)

main
maude

high-performance logical framework

main
mauve-aligner

multiple genome alignment

main
mayavi2

scientific visualization package for 2-D and 3-D data

main
mbpoll

command line utility to communicate with ModBus slave (RTU or TCP)

main
mbt

memory-based tagger-generator and tagger

main
mbtserver

Server extensions for the MBT tagger

main
mecat2

ultra-fast and accurate de novo assembly tools for SMRT reads

main
meep

software package for FDTD simulation

main
meep-mpi-default

software package for FDTD simulation, parallel (OpenMPI) version

main
meep-openmpi

software package for FDTD simulation, parallel (OpenMPI) version

main
megahit

ultra-fast and memory-efficient meta-genome assembler

main
melting

compute the melting temperature of nucleic acid duplex

main
merkaartor

map editor for OpenStreetMap.org

main
meryl

in- and out-of-core kmer counting and utilities

main
metabat

robust statistical framework for reconstructing genomes from metagenomic data

main
metaphlan2

Metagenomic Phylogenetic Analysis

main
metaphlan2-data

data package for Metagenomic Phylogenetic Analysis

main
metastudent

predictor of Gene Ontology terms from protein sequence

main
metastudent-data

predictor of Gene Ontology terms from protein sequence - data files

main
metastudent-data-2

predictor of Gene Ontology terms from protein sequence - data #2

main
metview

Interactive data visualization and analysis environment,

main
metview-data

Data needed for the Metview data analysis environment

main
mhap

locality-sensitive hashing to detect long-read overlaps

main
mia-doctools

Helper scripts for run-time document creation

main
mia-tools

Command line tools for gray scale image processing

main
mia-viewit

Viewer program for 3D data sets created by using MIA

main
microbegps

explorative taxonomic profiling tool for metagenomic data

main
microbiomeutil

Microbiome Analysis Utilities

main