Contents of section "Science" in suite "byzantium"

science-nanoscale-physics-dev

Debian Science Nanoscale Physics development packages

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science-neuroscience-cognitive

Debian Science packages for Cognitive Neuroscience

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science-neuroscience-modeling

Debian Science packages for modeling of neural systems

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science-physics-dev

Debian Science Physics-dev packages

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science-robotics-dev

Debian Robotics development packages

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science-tasks

Debian Science tasks for tasksel

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science-viewing-dev

Debian Science development of visualisation applications

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scoary

pangenome-wide association studies

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scram

Probabilistic Risk Analysis Tool

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scram-gui

SCRAM GUI front-end

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scrappie

basecaller for Nanopore sequencer

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scrm

simulator of evolution of genetic sequences

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sctk

speech recognition scoring toolkit

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scythe

Bayesian adaptor trimmer for sequencing reads

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sdaps

scripts for data acquisition with paper-based surveys

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sdrangelove

Osmocom Software Defined Radio

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seaview

Multiplatform interface for sequence alignment and phylogeny

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secrecy

tool to handle libsecrecy keys and encrypted files

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seer

genomic sequence element (kmer) enrichment analysis

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segemehl

short read mapping with gaps

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segyio-bin

SEG-Y read/write library for seismic processing (shell utilities)

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sentencepiece

Unsupervised text tokenizer and detokenizer

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sepp

phylogeny with ensembles of Hidden Markov Models

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seqan-apps

C++ library for the analysis of biological sequences

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seqkit

cross-platform and ultrafast toolkit for FASTA/Q file manipulation

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seqkit-examples

examples for seqkit: toolkit for FASTA/Q file manipulation

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seqmagick

imagemagick-like frontend to Biopython SeqIO

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seqprep

stripping adaptors and/or merging paired reads of DNA sequences with overlap

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seqprep-data

example data set for seqprep - only used for testing

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seqsero

Salmonella serotyping from genome sequencing data

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seqtk

Fast and lightweight tool for processing sequences in the FASTA or FASTQ format

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seriation

finds a suitable linear order for a set of objects

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seriation-data

test data for seriation

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sextractor

Dummy transitional package for name change

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sga

de novo genome assembler that uses string graphs

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shapeit4

fast and accurate method for estimation of haplotypes (phasing)

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shasta

nanopore whole genome assembly (binaries and scripts)

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shelxle

graphical user interface for SHELXL

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shovill

Assemble bacterial isolate genomes from Illumina paired-end reads

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shovill-examples

Test Data for shovill

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sibelia

comparative genomics tool

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sibelia-examples

comparative genomics tool (example data)

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sibsim4

align expressed RNA sequences on a DNA template

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sickle

windowed adaptive trimming tool for FASTQ files using quality

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siconos

modeling and simulation of nonsmooth dynamical systems (simulation runner tool)

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siconos-mechanics-tools

modeling and simulation of nonsmooth dynamical systems (mechanics tools)

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sigma-align

Simple greedy multiple alignment of non-coding DNA sequences

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sigviewer

GUI viewer for biosignals such as EEG, EMG, and ECG

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silx

Toolbox for X-Ray data analysis - Executables

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sim4

tool for aligning cDNA and genomic DNA

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