Contents of section "Science" in suite "crimson"

vcfanno

annotate a VCF with other VCFs/BEDs/tabixed files

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vcfanno-examples

examples for vcfanno: annotate a VCF with other VCFs/BEDs/tabixed files

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vcftools

Collection of tools to work with VCF files

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velvet

Nucleic acid sequence assembler for very short reads

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velvet-example

Example data for the Velvet sequence assembler

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velvet-long

Nucleic acid sequence assembler for very short reads, long version

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velvetoptimiser

automatically optimise Velvet do novo assembly parameters

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velvet-tests

Test data for the Velvet sequence assembler

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veusz

2D and 3D scientific plotting application with graphical interface

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virulencefinder

identify virulence genes in total or partial sequenced isolates of bacteria

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virulencefinder-examples

example data for virulencefinder

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visp-images-data

visual servoing library - dataset reference files

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vistrails

Science visualisation workflow toolkit

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vitables

graphical tool to browse and edit PyTables and HDF5 files

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vmatch

large scale sequence analysis software

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voro++

library for the computation of the Voronoi diagram

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voro++-examples

library for the computation of the Voronoi diagram (examples)

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voronota

Voronoi diagram-based tool to find atom contacts

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votca

Molecular dynamics analysis - coarse-graining and charge transport

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votca-data

VOTCA molecular dynamics analysis - basis sets and scripts

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votca-tutorials

VOTCA molecular dynamics analysis - tutorials

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vsearch

tool for processing metagenomic sequences

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vsearch-examples

Test Data for vsearch tool for processing metagenomic sequences

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v-sim

Visualize atomic structures

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v-sim-common

Visualize atomic structures (support files)

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v-sim-plugins

Plugins for V_Sim (a 3D visualization package)

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vt

toolset for short variant discovery in genetic sequence data

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vt-examples

toolset for short variant discovery in genetic sequence data (examples)

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wannier90

Maximally Localized Wannier Functions - executables

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wannier90-data

Maximally Localized Wannier Functions - documentation and examples

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wcslib-tools

Command line tools utilizing wcslib

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wcstools

Handle the WCS of a FITS image

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weightwatcher

Combine maps and polygon data for astronomical image processing

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weka

Machine learning algorithms for data mining tasks

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wham-align

Wisconsin's High-Throughput Alignment Method

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wigeon

reimplementation of the Pintail 16S DNA anomaly detection utility

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wise

comparison of biopolymers, like DNA and protein sequences

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wsclean

Fast generic widefield interferometric imager

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wtdbg2

de novo sequence assembler for long noisy reads

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wtdbg2-examples

Examples for wtdbg - de novo sequence assembler

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wxastrocapture

Windows linuX Astronomy Capture

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xbs

3-d models and movies of molecules

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xcas

Computer Algebra System - console and graphical calculator

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xcrysden

Crystalline and Molecular Structure Visualizer

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xcrysden-data

Crystalline and Molecular Structure Visualizer (Data Files)

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xdrawchem

Chemical structures and reactions editor

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xeus-python-dev

Native jupyter kernel for python (headers)

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xfoil

program for the design and analysis of subsonic airfoils

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xgboost

Scalable and Flexible Gradient Boosting (Executable)

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xgterm

Terminal emulator to work with IRAF

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