set of programs implementing The OpenMS Proteomic Pipeline
Conversion utility from pockettopo to therion, for cave surveying
Top-down proteoform identification and characterization (programs)
Top-down proteoform identification and characterization (common data)
transmembrane topology prediction
Application to calculate ramachandran z-scores
Exact combinatorial optimization for Graphical Models
Exact combinatorial optimization for Graphical Models - documentation
bulk submission of chromatogram data to dbEST
Documentation and sample files for trace2dbest
interpretation of DNA Sanger sequencing data
microwave and RF transmission line calculator
find coding regions within RNA transcript sequences
Runs formatted documents through transformations/translation
helper for transrate
find rho-independent transcription terminators in bacterial genomes
trajectory analyzer and visualizer
Parallelized reconstruction of phylogenetic trees by maximum likelihood
Reconstruction of phylogenetic trees by maximum likelihood
Java re-implementation of Michael Eisen's TreeView
Displays and prints phylogenetic trees
locate and display tandem repeats in DNA sequences
locate and display tandem repeats in DNA sequences (examples)
automate quality and adapter trimming for DNA sequencing
flexible read trimming tool for Illumina NGS data
toolkit to carry out genetic association for multi-category phenotypes
Cave Survey drawing software
genetic variant caller for Ion Torrent sequencing platforms
tiny web map service
build the compacted de Bruijn graph from many complete genomes
2.4 GHz wireless development platform for Bluetooth experimentation
Firmware for Ubertooth
Source code for the Ubertooth firmware
error correction algorithm designed for short-reads from NGS
Unicode Tokenizer
Data files for Ucto
Utilities for the UCX messaging library
universal hardware driver for Ettus Research products - host apps
Uniform Manifold Approximation and Projection
tools for processing UMI RNA-tag data
tools for processing UMI RNA-tag data (examples)
Utility for Nanopore Current Alignment to Large Expanses of DNA
hybrid assembly pipeline for bacterial genomes
hybrid assembly pipeline for bacterial genomes (data package)
high-performance phylogenetic diversity calculations (binaries)
Unihedron Device manager (UDM)
Toolkit for nucleic acid k-mer analysis
Parser for expressions concerning physical values
Powerful units converter with a GUI
Visualization Applet for RNA