Contents of section "GNU R" in suite "dawn"

r-bioc-seqlogo

GNU R sequence logos for DNA sequence alignments

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r-bioc-shortread

GNU R classes and methods for high-throughput short-read sequencing data

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r-bioc-singlecellexperiment

S4 Classes for Single Cell Data

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r-bioc-singler

BioConductor reference-based single-cell RNA-Seq annotation

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r-bioc-snpstats

BioConductor SnpMatrix and XSnpMatrix classes and methods

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r-bioc-sparsearray

efficient in-memory representation of multidimensional sparse arrays

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r-bioc-sparsematrixstats

BioConductor summary statistics for rows and columns of sparse matrices

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r-bioc-spatialexperiment

S4 Class for Spatially Resolved -omics Data

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r-bioc-stringdb

Search Tool for the Retrieval of Interacting proteins database

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r-bioc-structuralvariantannotation

Variant annotations for structural variants

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r-bioc-summarizedexperiment

BioConductor assay container

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r-bioc-sva

GNU R Surrogate Variable Analysis

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r-bioc-tcgabiolinks

GNU R/Bioconductor package for integrative analysis with GDC data

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r-bioc-tcgabiolinksgui.data

Data for the TCGAbiolinksGUI package

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r-bioc-tfbstools

GNU R Transcription Factor Binding Site (TFBS) Analysis

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r-bioc-titancna

Subclonal copy number and LOH prediction from whole genome sequencing

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r-bioc-tximport

transcript-level estimates for biological sequencing

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r-bioc-tximportdata

GNU R various transcript abundance quantifiers

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r-bioc-ucsc.utils

Low-level utilities to retrieve data from the UCSC Genome

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r-bioc-variantannotation

BioConductor annotation of genetic variants

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r-bioc-wrench

GNU R wrench normalization for sparse count data

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r-bioc-xvector

BioConductor representation and manpulation of external sequences

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r-bioc-zlibbioc

(Virtual) zlibbioc Bioconductor package

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r-cran-abind

GNU R abind multi-dimensional array combination function

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r-cran-acepack

GNU R package for regression transformations

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r-cran-actuar

GNU R actuarial functions and heavy tailed distributions

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r-cran-ade4

GNU R analysis of ecological data

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r-cran-adegenet

GNU R exploratory analysis of genetic and genomic data

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r-cran-adegraphics

GNU R lattice-based package for the representation of multivariate data

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r-cran-adephylo

GNU R exploratory analyses for the phylogenetic comparative method

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r-cran-admisc

Adrian Dusa's Miscellaneous GNU R functions

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r-cran-aer

Applied Econometrics with R

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r-cran-airr

GNU R AIRR data representation reference library

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r-cran-amap

Another Multidimensional Analysis Package

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r-cran-amelia

GNU R package supporting multiple imputation of missing data

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r-cran-amore

GNU R: A MORE flexible neural network package

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r-cran-animation

GNU R gallery of animations and utilities to create animations

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r-cran-apcluster

Affinity Propagation Clustering

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r-cran-ape

GNU R package for Analyses of Phylogenetics and Evolution

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r-cran-aplpack

Another Plot PACKage: stem.leaf, bagplot, faces, spin3R and others

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r-cran-argparse

GNU R command line parser for optional and positional arguments

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r-cran-argparser

GNU R command-line argument parser

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r-cran-arm

Data Analysis Using Regression and Multilevel/Hierarchical Models

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r-cran-arsenal

arsenal of GNU R functions for large-scale statistical summaries

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r-cran-askpass

safe password entry for GNU R, Git, and SSH

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r-cran-assertive.base

GNU R lightweight core of the 'assertive' package

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r-cran-assertthat

GNU R easy pre and post assertions

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r-cran-av

working with Audio and Video in GNU R

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r-cran-aweek

GNU R convert dates to arbitrary week definitions

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r-cran-backports

reimplementation of functions introduced since R-3.0.0

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