Contents of section "GNU R" in suite "dawn"

elpa-ess

Emacs mode for statistical programming and data analysis

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littler

GNU R scripting and command-line front-end -- transition package

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r-base

GNU R statistical computation and graphics system

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r-base-core

GNU R core of statistical computation and graphics system

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r-base-dev

GNU R installation of auxiliary GNU R packages

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r-bioc-affxparser

Affymetrix File Parsing SDK

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r-bioc-affy

BioConductor methods for Affymetrix Oligonucleotide Arrays

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r-bioc-affyio

BioConductor tools for parsing Affymetrix data files

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r-bioc-all

Bioconductor data package used by several bioc tools

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r-bioc-aroma.light

BioConductor methods normalization and visualization of microarray data

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r-bioc-basilisk

freezing Python dependencies inside Bioconductor packages

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r-bioc-basilisk.utils

Bioconductor basilisk installation utilities

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r-bioc-biobase

base functions for Bioconductor

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r-bioc-biocbaseutils

General utility functions for developing Bioconductor packages

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r-bioc-bioccheck

Bioconductor-specific package checks

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r-bioc-biocfilecache

GNU R management of files across sessions

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r-bioc-biocgenerics

generic functions for Bioconductor

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r-bioc-biocparallel

BioConductor facilities for parallel evaluation

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r-bioc-biocstyle

standard styles for vignettes and other Bioconductor documents

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r-bioc-biocversion

set the appropriate version of Bioconductor packages

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r-bioc-biocviews

Categorized views of R package repositories

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r-bioc-bladderbatch

GNU R bladder gene expression data illustrating batch effects

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r-bioc-chemminer

Cheminformatics Toolkit for R

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r-bioc-consensusclusterplus

GNU R determining cluster count and membership

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r-bioc-ctc

Cluster and Tree Conversion

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r-bioc-decontam

identify contaminants in marker-gene and metagenomics sequencing sata

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r-bioc-decoupler

infer biological activities from omics data

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r-bioc-densvis

density-preserving data visualization via non-linear dimensionality reduction

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r-bioc-dir.expiry

Bioconductor managing expiration for cache directories

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r-bioc-dnacopy

R package: DNA copy number data analysis

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r-bioc-dupradar

BioConductor assessment of duplication rates in RNA-Seq datasets

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r-bioc-ebseq

R package for RNA-Seq Differential Expression Analysis

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r-bioc-edger

Empirical analysis of digital gene expression data in R

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r-bioc-eir

Accelerated similarity searching of small molecules

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r-bioc-fmcsr

GNU R mismatch tolerant maximum common substructure searching

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r-bioc-genomeinfodbdata

BioConductor species and taxonomy ID look up tables

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r-bioc-geoquery

Get data from NCBI Gene Expression Omnibus (GEO)

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r-bioc-graph

handle graph data structures for BioConductor

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r-bioc-hsmmsinglecell

Single-cell RNA-Seq for differentiating human skeletal muscle myoblasts

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r-bioc-hypergraph

BioConductor hypergraph data structures

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r-bioc-ihw

GNU R independent hypothesis weighting

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r-bioc-impute

Imputation for microarray data

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r-bioc-interactivedisplaybase

base package for enabling powerful shiny web displays of Bioconductor objects

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r-bioc-limma

linear models for microarray data

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r-bioc-lpsymphony

Symphony integer linear programming solver in GNU R

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r-bioc-makecdfenv

BioConductor CDF Environment Maker

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r-bioc-matrixgenerics

S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects

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r-bioc-mergeomics

Integrative network analysis of omics data

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r-bioc-metagenomeseq

GNU R statistical analysis for sparse high-throughput sequencing

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r-bioc-metapod

GNU R meta-analyses on P-Values of differential analyses

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