identification of known plasmids from whole-genome sequencing reads
Parallel Local Sequence Alignment Search Tool
Parallel Local Sequence Alignment Search Tool (example data)
medical image reconstruction and registration
whole-genome association analysis toolset
command line handling of JPL ephemeres data
routines for predictions of positions in solar system
Programs for reading and writing parallel NetCDF files
Partial Order Alignment for multiple sequence alignment
population genetic software
adapter trimmer for Oxford Nanopore reads
toolkit for nanopore nucleotide sequencing data
toolkit for nanopore nucleotide sequencing data -- sample datasets
program for speech analysis and synthesis
Probabilistic Alignment Kit for DNA, codon and amino-acid sequences
prediction and analysis of protein nuclear localization signals
tool to design flanking oligo nucleotides for DNA amplification
tool to design flanking oligo nucleotides for DNA amplification (examples)
PReprocessing and INformation of SEQuence data (lite version)
PReprocessing and INformation of SEQuence data (example data)
Probabilistic multiple alignment program
Toolset for Genome-Wide Association Analysis
Example files for ProbABEL
multiple sequence alignment using partition function posterior probabilities
PROBabilistic CONSistency-based multiple sequence alignment
Extra programs from the probcons package
multiple alignment of protein sequences
Microbial (bacterial and archaeal) gene finding program
predictor of flexible/rigid protein residues from sequence
prediction of protein-protein interaction sites from sequence
neural network architecture for profbval
neural network architecture for profchop
neural network architecture for profcon
neural network architecture for profisis
neural network architecture for metadisorder
neural network architecture for norsnet
neural network architecture for profacc
neural network architecture for snapfun
neural network architecture for profphd
profphd helper utilities convert_seq and filter_hssp
per-residue prediction of bacterial transmembrane beta barrels
multiple genome alignment algorithms
Cartographic projection library (tools)
rapid annotation of prokaryotic genomes
Detection of (Co-)orthologs in large-scale protein analysis
selection of best-fit models of protein evolution
Protein Variation Effect Analyzer
ChIP-based identifcation of TF binding sites