Contents of section "Science" in suite "dawn"

staden

DNA sequence assembly (Gap4/Gap5), editing and analysis tools

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staden-common

Architecture independent files for Staden

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staden-io-lib-examples

programs for manipulating DNA sequencing files (usage examples)

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staden-io-lib-utils

programs for manipulating DNA sequencing files

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stardata-common

Common framework to manage astronomy packages

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starpu-examples

Task scheduler for heterogeneous multicore machines - exs

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stellarium

real-time photo-realistic sky generator

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stellarium-data

Stellarium data files

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step

interactive physical simulator for KDE

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stiff

convert scientific FITS images to the TIFF format

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stilts

Starlink Tables Infrastructure Library Tool Set

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stringtie

assemble short RNAseq reads to transcripts

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subarch-select

Select among binaries based upon x86 microarchitecture support

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subread

toolkit for processing next-gen sequencing data

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subread-data

data files for subread package

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suitename

categorize each suite in an RNA backbone

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sumaclust

fast and exact clustering of genomic sequences

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sumatra

fast and exact comparison and clustering of sequences

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sumo

Simulation of Urban MObility (SUMO)

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surankco

Supervised Ranking of Contigs in de novo Assemblies

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surpyvor

modification of VCF files with SURVIVOR

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survex

cave surveying and mapping software

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survex-aven

sophisticated cave survey viewer for Survex

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survivor

tool set for simulating/evaluating SVs

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svim

Structural variant caller for long sequencing reads

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swarm

robust and fast clustering method for amplicon-based studies

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swarp

Resample and co-add together FITS images

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swe-basic-data

Swiss Ephemeris library (basic set of ephemeris files).

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sweed

assessment of SNPs for their evolutionary advantage

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swe-standard-data

Swiss Ephemeris library (standard set of ephemeris files).

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tabix

generic indexer for TAB-delimited genome position files

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tandem-mass

mass spectrometry software for protein identification

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tantan

low complexity and tandem repeat masker for biosequences

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tclfitsy

Tcl FITS Extension

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t-coffee

Multiple Sequence Alignment

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t-coffee-examples

annotated examples for the use of T-Coffee

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terraintool

Generates survex/therion terrain models from SRTM/NASADEM data.

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therion

Cave surveying - 2D and 3D drawing software

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therion-viewer

Cave surveying - 3D viewer for therion models

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theseus

superimpose macromolecules using maximum likelihood

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theseus-examples

superimpose macromolecules using maximum likelihood (examples)

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thesias

Testing Haplotype Effects In Association Studies

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threeb

3B Microscopy Analysis Software - command-line tool

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threeb-imagej

3B Microscopy Analysis Software - ImageJ plugin

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tiddit

structural variant calling

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tigr-glimmer

Gene detection in archea and bacteria

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timbl

Tilburg Memory Based Learner

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timblserver

Server extensions for Timbl

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tiny-dnn

header only deep learning framework in C++

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tippecanoe

build vector tilesets from large collections of GeoJSON features

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