suite of utilities for comparing genomic features

test data for the bedtools package

multiple sequence alignment viewer and phylogenetic tool

Streaming quantification for high-throughput sequencing

extension of awk for biological sequence analysis

tools for early stage alignment file processing

Haplotype phasing within a genotyped cohort or using a phased reference panel

Examples for bio-eagle

artificial life program that simulates evolution of organisms

Perl tools for computational molecular biology

BioPerl wrappers: scripts

clustering and assembling short reads for bioinformatics

format conversion tools for biomedical data formats

utilities for biological sequence analysis

Syntax Highlighting for Computational Biology (metapackage)

Syntax Highlighting for Computational Biology (common files)

Syntax Highlighting for Computational Biology (example)

Syntax Highlighting for Computational Biology (gedit)

Syntax Highlighting for Computational Biology (less)

Syntax Highlighting for Computational Biology (vim)

domain specific language (DSL) for processing the VCF format

Bayesian Inference of Transcripts from Sequencing Data

Interactive bitwise operation in ncurses

Chemical structures editor

mapping single-molecule sequencing reads

interactive browser of sequence alignments

BlueBrain HPC Team C++ Development Guidelines

software analysis benchmarking toolkit

Blue Obelisk Data Repository

Efficient large cohorts genome-wide Bayesian mixed-model association testing

Examples for bolt-lmm

SMT solver for bit-vectors and arrays

Ultrafast memory-efficient short read aligner

ultrafast memory-efficient short read aligner

Examples for bowtie2

Examples for bowtie, the ultrafast memory-efficient short read aligner

Pretty-printing of multiple sequence alignments

Bio++ Phylogenetic Viewer

Bio++ program suite

Examples for Bio++ program suite

sample files and demo scripts for Brain2Mesh

BLAST Ring Image Generator

Bioinformatics Technology Lab common code library tools

benchmarking sets of universal single-copy orthologs

program for manipulating BUS files for single cell RNA-Seq datasets

Burrows-Wheeler Aligner

converter between DFT electronic structure codes formats

new generation algebraic specification and programming language

Emacs major mode for editing CafeOBJ source code

Three-Dimensional Structural Finite Element Program