Perl tools for computational molecular biology

BioPerl wrappers: scripts

clustering and assembling short reads for bioinformatics

format conversion tools for biomedical data formats

utilities for biological sequence analysis

Syntax Highlighting for Computational Biology (metapackage)

Syntax Highlighting for Computational Biology (common files)

Syntax Highlighting for Computational Biology (example)

Syntax Highlighting for Computational Biology (gedit)

Syntax Highlighting for Computational Biology (less)

Syntax Highlighting for Computational Biology (vim)

domain specific language (DSL) for processing the VCF format

Bayesian Inference of Transcripts from Sequencing Data

Interactive bitwise operation in ncurses

Chemical structures editor

mapping single-molecule sequencing reads

interactive browser of sequence alignments

BlueBrain HPC Team C++ Development Guidelines

software analysis benchmarking toolkit

Blue Obelisk Data Repository

Efficient large cohorts genome-wide Bayesian mixed-model association testing

Examples for bolt-lmm

SMT solver for bit-vectors and arrays

Ultrafast memory-efficient short read aligner

ultrafast memory-efficient short read aligner

Examples for bowtie2

Examples for bowtie, the ultrafast memory-efficient short read aligner

Pretty-printing of multiple sequence alignments

Bio++ Phylogenetic Viewer

Bio++ program suite

Examples for Bio++ program suite

BLAST Ring Image Generator

Bioinformatics Technology Lab common code library tools

benchmarking sets of universal single-copy orthologs

program for manipulating BUS files for single cell RNA-Seq datasets

Burrows-Wheeler Aligner

converter between DFT electronic structure codes formats

Planetary ephemeris data access tools

Daemon for e-Callisto hardware

International Geomagnetic Reference Field data for casacore

Jet Propulsion Laboratory Development Ephemeris DE200 for casacore

Jet Propulsion Laboratory Development Ephemeris DE405 for casacore

Table of spectral line frequencies for casacore

Table of radio observatory coordinates for casacore

Table of ICRF reference source coordinates for casacore

Difference table between TAI and UTC for casacore

Tools built with CASA

Cassegrain antenna modelling

index and search tool in genomic sequences

taxonomic classification of contigs and metagenome-assembled genomes (MAGs)