visually comparing bacterial, plasmid, chloroplast, or mitochondrial sequences

example data for testing the package cct

Constant DataBase indexing and retrieval tools for multi-FASTA files

suite of programs designed to quickly group sequences

rapid and memory-efficient system for classification of DNA sequences

Tools for using the 3rd edition of Constraint Grammar (CG-3)

Metapackage providing both CG-3 CLI dev tools and dev library

CFD General Notation System - Conversion tools

Circular Genome Viewer

create and visualize 3-dimensional drawings of simple molecules

Repertoire clonal assignment toolkit (Python 3)

conformance checker for baseline TIFFs

web service providing molecular structures in open formats

set of molecular structures in open formats

derive IUPAC systematic names for chemical structures

chemical structures drawing program

detects likely chimeras in PCR amplified DNA

tools performing common ChIP-Seq data analysis tasks

tools performing common ChIP-Seq data analysis tasks (data)

Chromatin state discovery and characterization

Large-scale systematic epigenome imputation

Convert crystallographic descriptions into HKL F^2 reflection lists

transform CIF data among CIF formats and dialects

Suite of tools to manipulate, validate and query mmCIF files

plotter for visualizing data

plotter for visualizing data - helper utilities

automatic build tool for ROOT data analysis software

extremely efficient phylogenetic tree reconstruction

inference of bacterial microevolution using multilocus sequence data

Efficient Inference of Recombination in Whole Bacterial Genomes

inference of homologous recombination in bacteria using whole genome sequences

General-purpose multiple sequence alignment program for proteins

global multiple nucleotide or peptide sequence alignment

Multiple alignment of nucleic acid and protein sequences (graphical interface)

MIP tables for the Climate Model Output Rewriter library

Computational Morphometry Toolkit

reduction of images carried out by CCD camera

reduction of images carried out by CCD camera (share)

Copy number variant detection from targeted DNA sequencing

Correspondence Analysis of Codon Usage

Coin-or branch-and-cut mixed integer programming solver

Coin-or linear programming solver

Software package for semidefinite programming (binaries)

COIN-OR mixed integer programming

Coin-or branch-and-cut mixed integer programming solver (shared libraries)

COIN-OR Cut Generation Library

Coin-or linear programming solver (shared libraries)

COIN-OR collection of utility classes (shared libraries)

COIN-OR Open Solver Interface

COIN-OR solver for mixed-integer linear programs (shared libraries)