GNU R binary alignment (BAM), variant call (BCF), or tabix file import

Subread Sequence Alignment and Counting for R

GNU R interface to genome browsers and their annotation tracks

GNU R client library for the WikiPathways API

foundation of array-like containers in Bioconductor

BioConductor S4 implementation of vectors and lists

scalable analysis of differential transcript usage for RNA-sequencing

GNU R parse and analyze Illumina SAV files

creating a DelayedMatrix of scaled and centered values using GNU R

BioConductor methods for single-cell RNA-Seq data analysis

BioConductor single-cell RNA-Seq analysis utilities

GNU R sequence logos for DNA sequence alignments

GNU R classes and methods for high-throughput short-read sequencing data

S4 Classes for Single Cell Data

BioConductor reference-based single-cell RNA-Seq annotation

BioConductor SnpMatrix and XSnpMatrix classes and methods

efficient in-memory representation of multidimensional sparse arrays

BioConductor summary statistics for rows and columns of sparse matrices

S4 Class for Spatially Resolved -omics Data

Search Tool for the Retrieval of Interacting proteins database

Variant annotations for structural variants

BioConductor assay container

GNU R Surrogate Variable Analysis

GNU R/Bioconductor package for integrative analysis with GDC data

Data for the TCGAbiolinksGUI package

GNU R Transcription Factor Binding Site (TFBS) Analysis

Subclonal copy number and LOH prediction from whole genome sequencing

Tools for making TxDb objects from genomic annotations

Transcript Quantification Import with Automatic Metadata

transcript-level estimates for biological sequencing

GNU R various transcript abundance quantifiers

Low-level utilities to retrieve data from the UCSC Genome

BioConductor annotation of genetic variants

GNU R wrench normalization for sparse count data

BioConductor representation and manpulation of external sequences

(Virtual) zlibbioc Bioconductor package

GNU R abind multi-dimensional array combination function

GNU R package for regression transformations

GNU R actuarial functions and heavy tailed distributions

GNU R analysis of ecological data

GNU R exploratory analysis of genetic and genomic data

GNU R lattice-based package for the representation of multivariate data

GNU R exploratory analyses for the phylogenetic comparative method

Adrian Dusa's Miscellaneous GNU R functions

Applied Econometrics with R

GNU R package for analyzing factorial experiments using ANOVA or mixed models

GNU R AIRR data representation reference library

Another Multidimensional Analysis Package

GNU R package supporting multiple imputation of missing data

GNU R: A MORE flexible neural network package