selection of best-fit models of protein evolution

Protein Variation Effect Analyzer

ChIP-based identifcation of TF binding sites

auxiliary data for PScan-ChIP

search for transcription factor binding sites

Point Spread Function model extractor

bacterial localization prediction tool

toolbox for vision research -- arch/interpreter independent part

toolbox for vision research -- arch-specific parts

Extract sequence from a fasta or fastq

Collection of routines for radio interferometric imaging

computes metrics and generates Interactive QC plots

installs data from the Ensembl genome database

Fast Azimuthal Integration scripts

fast random access to sequences from FASTA/Q file - command

Applications and toolkit for X-ray fluorescence analysis -- scripts

Architecture independent data files for PyMca

Python Multi-Order Coverage maps tool for Virtual Observatory

Molecular Graphics System

data files for PyMOL

Python tools for Nano-structures Crystallography (Scripts)

OHSDI OMOP Common Data Model tools

simulates the launching of satellites

ADIOS2Wrappers for DOLFINx (Python 3)

Data Representation Standard library for antibody and TCR sequences

edit and Hamming distances for biological sequences

library to enable flexible, scalable operations on genomic interval dataframes

Simulate and fit X-ray and neutron GISAS -- Python3

prepare CIF files for electronic structure calculations

cython wrapper for khash-sets/maps, efficient implementation of isin and unique

VCF parser based on htslib (Python 3)

DataLad extension for new features and improved user experience

DICOM to NIfTI conversion - python3 package

platform for exploring biological deep-sequencing data

handlig GTF-like sequence-associated interal-annotation

adapter prediction for small RNA sequencing - library

Flexible and powerful tensor operations for readable code

visualizing high-throughput microbial community data

Escript/Finley finite elements Python3 system (OpenMP + MPI)

(OpenMP + MPI)

EUMETSAT Data Access Client (Python 3 library and CLI)

wraps command line tools to assess variants in gene sequences

flexible and extensible software library for handling sequence graphs

Work with GFF and GTF files in a flexible database framework

parser for gene transfer format (aka GFF2)

is a data integration algorithm

Jupyter Sphinx Extension - Python3

binary encoding of biological structures (Python 3)

Python GPU framework for alchemical free energy calculations (Python 3)

Navigation tool for ARPES data (Python 3)