Perlin noise for image generation

Open Neural Network Exchange (ONNX) (Python)

parameter and topology file editor and molecular mechanical simulator

tools for manipulating and editing PDB files (Python 3 package)

generate atomic oligopeptide 3D structure from sequence

Fast, flexible and easy to use probabilistic modelling

Protein Binding Affinity Prediction (Python 3)

access to 2bit files

Biological Expression Language

Python 3 module for quick access to bigBed and bigWig files

Image Tool for multidimensional analysis (Python 3)

Python implementation of the multistate Bennett acceptance ratio (MBAR)

PyNLPl is a library for Natural Language Processing (Python 3 version)

Object-Oriented Crystallographic Library bindings (Python 3)

Python3 high-level API to the Visualization Toolkit (VTK)

Binding to the OpenCL backends of VkFFT - Python3

modeling of X-ray diffraction (XRD) patterns of disordered lamellar structures

scikit-learn compatible neural network library that wraps PyTorch

numerical representation of differences between strings

Data manipulation and transformation for audio signal processing

PyTorch extension library of optimized graph cluster algorithms (Python 3)

High-level library to help with training and evaluating in PyTorch

PyTorch Extension Library of Optimized Scatter Operations

PyTorch Extension Library of Optimized Autograd Sparse Matrix Operations

Datasets, Transforms and Models specific to Computer Vision

Moments for truncated multivariate normal distributions for Python

sequence logo generator

Native jupyter kernel for python (python library)

Scalable and Flexible Gradient Boosting (Python3)

X-ray Reference Data (Python 3)

X-ray absorption, fluorescence spectroscopy and diffraction data analysis

XRay Tracer and wave propagation (Python 3)

Dithered image combination for Python (Test data)

Documentation for Escript/Finley

1D/2D indexing and querying with a pair of genomic coordinates (examples)

interactive editor for scientific Python

Design template package for QIIME 2 Plugins

demultiplexing Oxford Nanopore reads from FASTQ files

demultiplexing Oxford Nanopore reads from FASTQ files (examples)

quality control of genomic sequences

Remote desktop service with virtual machines in a browser (DARTS).

FITS manipulation tools

FITS file viewer based on DPUSER

Geographic Information System (GIS)

QGIS3 plugin to read survex 3d files, for cave surveying

QGIS API documentation

QGIS - architecture-independent data

GRASS plugin for QGIS

GRASS plugin for QGIS - architecture-independent data

GRASS provider for QGIS