Debian Science Physics-dev packages

Debian Robotics development packages

Debian Science tasks for tasksel

Debian Science development of visualisation applications

pangenome-wide association studies

Probabilistic Risk Analysis Tool

SCRAM GUI front-end

basecaller for Nanopore sequencer

simulator of evolution of genetic sequences

Bayesian adaptor trimmer for sequencing reads

CLI tool for Simple Domain Modeling Language (SDML)

Multiplatform interface for sequence alignment and phylogeny

tool to handle libsecrecy keys and encrypted files

genomic sequence element (kmer) enrichment analysis

short read mapping with gaps

Unsupervised text tokenizer and detokenizer

C++ library for the analysis of biological sequences

pre-filter for the counting of very large collections of nucleotide sequences

pre-filter for querying very large collections of nucleotide sequences

cross-platform and ultrafast toolkit for FASTA/Q file manipulation

examples for seqkit: toolkit for FASTA/Q file manipulation

imagemagick-like frontend to Biopython SeqIO

stripping adaptors and/or merging paired reads of DNA sequences with overlap

example data set for seqprep - only used for testing

Salmonella serotyping from genome sequencing data

Fast and lightweight tool for processing sequences in the FASTA or FASTQ format

finds a suitable linear order for a set of objects

test data for seriation

de novo genome assembler that uses string graphs

fast and accurate method for estimation of haplotypes (phasing)

nanopore whole genome assembly (binaries and scripts)

graphical user interface for SHELXL

put Shiny web apps online

Assemble bacterial isolate genomes from Illumina paired-end reads

Test Data for shovill

comparative genomics tool

comparative genomics tool (example data)

align expressed RNA sequences on a DNA template

windowed adaptive trimming tool for FASTQ files using quality

pipeline for detecting Somatic Insertion of DE novo RETROcopies

Camera calibration software

DICOM viewer

Simple greedy multiple alignment of non-coding DNA sequences

GUI viewer for biosignals such as EEG, EMG, and ECG

Toolbox for X-Ray data analysis - Executables

tool for aligning cDNA and genomic DNA

batch spliced alignment of cDNA sequences to a target genome

comparative metagenomics method dedicated to NGS datasets

approximate comparative metagenomics method dedicated to NGS datasets

simulation model for breast/lung cancer risk