Bioconductor resampling-based multiple hypothesis testing

Exploratory analysis and differential expression for RNA-seq data

BioConductor collection of PCA methods

GNU R identification of domain isotypes in pfam data

BioConductor collection of pre-processing functions

activity inference from gene expression

S4 generic functions for Bioconductor proteomics infrastructure

qusage: Quantitative Set Analysis for Gene Expression

GNU R package for Q-value estimation for FDR control

R interface to the graph algorithms contained in the BOOST library

GNU R HDF5 compression filters

GNU R hdf5 library

HTSlib high-throughput sequencing library as GNU R package

GNU R Teproducibility-Optimized Test Statistic

Subread Sequence Alignment and Counting for R

GNU R client library for the WikiPathways API

GNU R parse and analyze Illumina SAV files

GNU R sequence logos for DNA sequence alignments

BioConductor SnpMatrix and XSnpMatrix classes and methods

BioConductor summary statistics for rows and columns of sparse matrices

Search Tool for the Retrieval of Interacting proteins database

Data for the TCGAbiolinksGUI package

transcript-level estimates for biological sequencing

GNU R various transcript abundance quantifiers

GNU R wrench normalization for sparse count data

(Virtual) zlibbioc Bioconductor package

GNU R abind multi-dimensional array combination function

GNU R package for regression transformations

GNU R actuarial functions and heavy tailed distributions

GNU R analysis of ecological data

GNU R exploratory analysis of genetic and genomic data

GNU R lattice-based package for the representation of multivariate data

GNU R exploratory analyses for the phylogenetic comparative method

Adrian Dusa's Miscellaneous GNU R functions

Applied Econometrics with R

GNU R AIRR data representation reference library

Another Multidimensional Analysis Package

GNU R package supporting multiple imputation of missing data

GNU R: A MORE flexible neural network package

GNU R gallery of animations and utilities to create animations

Affinity Propagation Clustering

GNU R package for Analyses of Phylogenetics and Evolution

Another Plot PACKage: stem.leaf, bagplot, faces, spin3R and others

GNU R command line parser for optional and positional arguments

GNU R command-line argument parser

Data Analysis Using Regression and Multilevel/Hierarchical Models

arsenal of GNU R functions for large-scale statistical summaries

safe password entry for GNU R, Git, and SSH

GNU R lightweight core of the 'assertive' package

GNU R assertions to check properties of sets